Sunday, 7 June 2015

Protein Synthesis


  • DNA molecules are found in the nucleus of the cell, but the ribosomes needed in protein synthesis are found in the cytoplasm.
  • The DNA is too large to move out of the nucleus.
  • Instead a section is copied into RNA.
  • This process is called transcription.
  • The RNA leaves the nucleus and joins with a ribosome, where it can be used to synthesise a protein.
  • This process is called translation.
There are 2 types of RNA:
  1. Messenger RNA (mRNA):
  • This carries the genetic code from the DNA in the nucleus to the cytoplasm.
  • It's 3 adjacent bases are called a codon.
     2.  Transfer RNA (tRNA):
  • This carries the amino acids to the ribosomes.
  • It has an amino acid building site at one end and a sequence of 3 bases at the other end called an anticodon.

Transcription

  • RNA polymerase attaches to the DNA double helix at the beginning of a gene.
  • This causes the hydrogen bonds between the 2 DNA strands to break, separating the strands, and uncoiling the DNA molecule.
  • One of the strands is then used as a template to make an mRNA copy, the strand is called the antisense strand.
  • The RNA polymerase lines up free RNA nucleotides alongside the template strand.
  • Complementary base pairing means that the mRNA strand is a reverse copy of the antisense strand.
  • Except that the base T on the antisense strand is replaced by base U in RNA.
  • As soon as the RNA nucleotides have paired with their complementary bases, they're joined together, forming an mRNA molecule.
  • RNA polymerase moves along the DNA strand, separating the strands and assembling the mRNA strand.
  • The hydrogen bonds between the uncoiled strands of DNA re-form once the RNA polymerase has passed by and the strands coil back into a double helix.
  • RNA polymerase stops making mRNA and detaches from the DNA once is reaches a stop codon.
  • The mRNA then moves out of the nucleus through a nuclear pore and attaches itself to a ribosome in the cytoplasm.


mRNA Modification


  • Genes contain sections that don't code for amino acids, called introns.
  • All the sections that do code for amino acids are called exons.
  • During transcription, both introns and exons are copied into mRNA.
  • A process then occurs called splicing, this is when introns are removed and exons are joined forming mRNA strands.
  • This takes place in the nucleus.
  • The exons are then joined together in different orders to form different mRNA strands.
  • This means more than 1 amino acid sequence, and therefore, more than 1 protein, can be produced from 1 gene.
  • After splicing the mRNA leaves the nucleus for the next stage of protein synthesis.


Translation


  • The mRNA attaches itself to a ribosome.
  • A tRNA molecule carrying an amino acid, with an anticodon that's complementary to the 1st codon on the mRNA, attaches itself to the mRNA by complementary base pairing.
  • A 2nd tRNA molecule attaches itself to the next codon on the mRNA in the same way.
  • The 2 amino acids attached to the tRNA molecules are joined by a peptide bond.
  • The 1st tRNA molecule moves away, leaving its amino acid behind.
  • A 3rd tRNA molecule binds to the next codon on the mRNA.
  • Its amino acid binds to the first 2 and the 2nd tRNA molecule moves away.
  • This process continues, producing a chain of linked amino acids (a polypeptide chain), until there's a stop codon on the mRNA molecule.
  • The polypeptide chain (protein) then moves away from the ribosome.


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